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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Raly, hnRNP-associated with lethal yellow
Sequence ID:NM_001139511
NM_001139512
NM_001139513
NM_023130
Entrez Gene ID:19383
Ensembl ID:ENSMUSG00000027593

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1|2 88.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 154859718 - 154861867

 Exon Info From UCSC:
NM_001139511
NM_001139512
NM_001139513
NM_023130

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2810841Full LengthBC004851hnRNP-associated with lethal yellow
2811315Full LengthBC016587hnRNP-associated with lethal yellow

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075619  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001139511 NP_001132983    
NM_001139512 NP_001132984    
NM_001139513 NP_001132985 Q64012  
NM_015770 NP_056585 Q03288 Agouti
NM_023130 NP_075619   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
S63413 AAA15908 Q03288
L06451 AAA37201 Q03288
S72641 AAC60688 Q64012
AF148458 AAF04488 Q64012
BC004851 AAH04851 Q64012
BC016587 AAH16587 Q64012
S70320 AAP19635 Q03288
S70326 AAP19636 Q03288
S70394 AAP19637 Q03288
S74479 AAP31517 Q03288
S74489 AAP31519 Q03288
S74493 AAP31520 Q03288
AK014356 BAB29294 Q64012
Q3U3F6
AK135386 BAE22515 Q3U3F6
AK154787 BAE32830 Q3U3F6
AK168781 BAE40615 Q3TGD3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Raly NP_001132985 R.norvegicus Raly 296301   NP_001011958 98
H.sapiens RALY 22913 Gene Info NP_057951 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)