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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdgfra, Platelet derived growth factor receptor, alpha polypeptide
Sequence ID:NM_001083316
NM_011058
Entrez Gene ID:18595
Ensembl ID:ENSMUSG00000029231

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.3|5 42.0

Chromosomal Position (from UCSC)

Chromosomal Position:5: 75153586 - 75162720

 Exon Info From UCSC:
NM_001083316
NM_011058

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5704645Full LengthBC053036platelet derived growth factor receptor, alpha polypeptide
4209622IncompleteBC037467platelet derived growth factor receptor, alpha polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035188  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001083316 NP_001076785 P26618 EC 2.7.10.1  
NM_011058 NP_035188 P26618 EC 2.7.10.1 ig
I-set
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M57683 AAA39733 P26618 EC 2.7.10.1
M84607 AAA39904 P26618 EC 2.7.10.1
BC037467 AAH37467 Q8CGH8  
BC053036 AAH53036 P26618 EC 2.7.10.1
DQ912857 ABI96988 Q06BS2  
AK081664 BAC38283 P26618 EC 2.7.10.1
AK136490 BAE23004 P26618 EC 2.7.10.1
AK139094 BAE23888 Q3UTU2  
AK147267 BAE27808 P26618 EC 2.7.10.1
AK163952 BAE37548 P26618 EC 2.7.10.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdgfra NP_035188 R.norvegicus Pdgfra 25267   NP_036934 96
H.sapiens PDGFRA 5156 Gene Info NP_006197 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta