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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hist1h1b, histone cluster 1, H1b
Sequence ID:NM_020034
Entrez Gene ID:56702
Ensembl ID:ENSMUSG00000058773

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13|13 A2-A3

Chromosomal Position (from UCSC)

Chromosomal Position:13: 21779894 - 21780625

NM_020034 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16722187175121872422

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015049Full LengthBC146469histone cluster 1, H1b
40055256IncompleteBC114579histone cluster 1, H1b
100014365BC140310histone cluster 1, H1b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064418  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020034 NP_064418 P43276
Q5T003
Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC114579 AAI14580 Q1WWK3
BC140310 AAI40311  
BC146469 AAI46470  
AK020117 BAB32001 P43276

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hist1h1b NP_064418 R.norvegicus Hist1h1b 680522   NP_001102887 96
H.sapiens HIST1H1B 3009 Gene Info NP_005313 92
A.gambiae AgaP_AGAP010461 1272577   XP_311486 56
A.gambiae AgaP_AGAP011193 1270732   XP_309451 54
A.gambiae AgaP_AGAP005266 1274984   XP_314186 53
A.gambiae AgaP_AGAP005264 1274982   XP_314184 53
A.gambiae AgaP_AGAP005265 1274983   XP_314185 47
D.melanogaster His1:CG33840 3772225   NP_001027344 44
D.melanogaster His1:CG33852 3771803   NP_001027364 44
D.melanogaster His1:CG33855 3771991   NP_001027369 44
D.melanogaster His1:CG33822 3772665   NP_001027314 44
D.melanogaster His1:CG33816 3771816   NP_001027304 44
D.melanogaster His1:CG33828 3771910   NP_001027324 44
D.melanogaster His1:CG33813 3771838   NP_001027299 44
D.melanogaster His1:CG33864 3772409   NP_001027384 44
D.melanogaster His1:CG33861 3771736   NP_001027379 44
D.melanogaster His1:CG33843 3772004   NP_001027349 44
D.melanogaster His1:CG33849 3771912   NP_001027359 44
D.melanogaster His1:CG33831 3772075   NP_001027329 44
D.melanogaster His1:CG33858 3772581   NP_001027374 44
D.melanogaster His1:CG33834 3771911   NP_001027334 44
D.melanogaster His1:CG33825 3772715   NP_001027319 44
D.melanogaster His1:CG33846 3772702   NP_001027354 44
D.melanogaster His1:CG33810 3771879   NP_001027295 44
D.melanogaster His1:CG33837 3772077   NP_001027339 44
D.melanogaster His1:CG33804 3771818   NP_001027286 44
D.melanogaster His1:CG31617 318854   NP_724341 44
D.melanogaster His1:CG33819 3771981   NP_001027309 44
D.melanogaster His1:CG33807 3771734   NP_001027290 43
D.melanogaster His1:CG33801 3772056   NP_001027282 43
A.thaliana AT1G06760 837187   NP_172161 42
N.crassa NCU06863 3874176   XP_958029 42
A.thaliana AT2G30620 817612   NP_180620 38
S.cerevisiae HHO1 855976   NP_015198 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)