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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ercc5, excision repair cross-complementing rodent repair deficiency, complementation group 5
Sequence ID:NM_011729
Entrez Gene ID:22592
Ensembl ID:ENSMUSG00000026048

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 B|1 26.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 44147915 - 44163729

 Exon Info From UCSC:
NM_011729

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055682Full LengthBC141070excision repair cross-complementing rodent repair deficiency, complementation group 5
30355763IncompleteBC060659excision repair cross-complementing rodent repair deficiency, complementation group 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011729 NP_035859   XPG_N
XPG_I

Related Sequences

 
mRNAGenPeptSwissProt
U40796 AAA91039 P35689
BC060659 AAH60659 Q6P9Q0
BC141070 AAI41071 B2RUC3
D16306 BAA03813 P35689
AK038822 BAC30139 Q8CAG2
AK137563 BAE23409 Q3UV64
AK160581 BAE35888 Q3TUT3
AK160645 BAE35937 Q3TUN4
AK164205 BAE37682 Q3TPQ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ercc5 NP_035859 R.norvegicus Ercc5 301382   NP_001100380 83
H.sapiens ERCC5 2073 Gene Info NP_000114 70
A.gambiae AgaP_AGAP008939 1279909   XP_319693 41
S.pombe rad13 2541051   NP_596095 35
D.melanogaster Chrac-14 3772329   NP_001027231 34
N.crassa NCU07498 3881194   XP_965045 33
S.cerevisiae RAD2 853174   NP_011774 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)