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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arf3, ADP-ribosylation factor 3
Sequence ID:NM_007478
Entrez Gene ID:11842
Ensembl ID:ENSMUSG00000051853

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 F2

Chromosomal Position (from UCSC)

Chromosomal Position:15: 98737626 - 98739084

NM_007478 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
128699856805698570924
287029949857142198571545
299531059857175498571864
310633429857302398573259
334334819859341098593548

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3582243Full LengthBC014778ADP-ribosylation factor 3
3969152Full LengthBC024935ADP-ribosylation factor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031504  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007478 NP_031504 P61205
Q3U344
Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC014778 AAH14778 P61205
Q3U344
BC024935 AAH24935 P61205
Q3U344
D87900 BAA13492 P61205
Q3U344
AK017249 BAB30652 Q9D3N9
AK154948 BAE32945 P61205
Q3U344

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arf3 NP_031504 H.sapiens ARF3 377 Gene Info NP_001650 100
R.norvegicus Arf3 140940   NP_543180 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)