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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apob, apolipoprotein B
Sequence ID:NM_009693
Entrez Gene ID:238055
Ensembl ID:ENSMUSG00000020609

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A1.1|12 2.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 8010401 - 8016835

 Exon Info From UCSC:
NM_009693

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4163231IncompleteBC028880apolipoprotein B
5052989IncompleteBC038263apolipoprotein B
6749630IncompleteBC100607apolipoprotein B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009693 NP_033823    

Related Sequences

 
mRNAGenPeptSwissProt
BC038263 AAH38263 Q8CGG8
BC100607 AAI00608 Q497D8
BC141357 AAI41358 Q3UH74
BC141360 AAI41361 Q3UH74
AK147540 BAE27983 Q3UH74

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apob NP_033823 R.norvegicus Apob 54225   NP_062160 89
H.sapiens APOB 338 Gene Info NP_000375 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)