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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. P4ha1, procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
Sequence ID:NM_011030
Entrez Gene ID:18451
Ensembl ID:ENSMUSG00000019916

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B4|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 59323363 - 59372329

 Exon Info From UCSC:
NM_011030

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3484815Full LengthBC009654procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035160  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011030 NP_035160 Q60715 EC 1.14.11.2 2OG-FeII_Oxy
TPR_2
P4Ha_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U16162 AAC52197 Q60715 EC 1.14.11.2
BC009654 AAH09654 Q60715 EC 1.14.11.2
AK045008 BAC32183 Q60715 EC 1.14.11.2
AK149127 BAE28745 Q3UF16  
AK160798 BAE36020 Q60715 EC 1.14.11.2
AK161212 BAE36242 Q3TTT2  
AK165468 BAE38205 Q3TN84  
AK169726 BAE41331 Q60715 EC 1.14.11.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus P4ha1 NP_035160 R.norvegicus P4ha1 64475   NP_742059 97
H.sapiens P4HA1 5033 Gene Info NP_001017962 95
A.gambiae AgaP_AGAP000971 1270466   XP_309164 50
D.melanogaster PH4alphaEFB 43620   NP_733371 49
C.elegans phy-2 178170   NP_502317 48
C.elegans dpy-18 176569   NP_499464 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)