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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cd4, CD4 antigen
Sequence ID:NM_013488
Entrez Gene ID:12504
Ensembl ID:ENSMUSG00000023274

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F2|6 60.18 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 124866247 - 124879454

NM_013488 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11583124814710124816292
15841651124816621124816688
16521770124817026124817144
17711971124817682124817882
19722307124820262124820597
23082544124822461124822697
25452706124822986124823147
27072874124829324124829491
28752965124829620124829710
29663095124838097124838226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3670597Full LengthBC039137CD4 antigen

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038516  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013488 NP_038516 Q3TSV7
P06332
ig
C2-set

Related Sequences

 
mRNAGenPeptSwissProt
M13816 AAA37267 Q3TSV7
P06332
M36850 AAA39401 Q3TSV7
P06332
U75219 AAB18133 P70443
AF045882 AAC01764 O55054
BC039137 AAH39137 Q3TSV7
P06332
AK153966 BAE32284 Q3TSV7
P06332
AK161775 BAE36568 Q3TSV7
P06332
X04836 CAA28539 Q3TSV7
P06332

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd4 NP_038516 R.norvegicus Cd4 24932   NP_036837 75
H.sapiens CD4 920 Gene Info NP_000607 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta