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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Sequence ID:NM_007840
Entrez Gene ID:13207
Ensembl ID:ENSMUSG00000020719

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11 63.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 106780355 - 106781044

 Exon Info From UCSC:
NM_007840

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6312791Full LengthBC108369DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
6827275Full LengthBC062916DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
40110366Full LengthBC129873DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
40110367Full LengthBC129874DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
6466882IncompleteBC086320DEAD (Asp-Glu-Ala-Asp) box polypeptide 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031866  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007840 NP_031866 Q8BTS0   DEAD
Helicase_C
P68HR

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009142 AAH09142 Q921Y3  
BC062916 AAH62916 Q8BTS0  
BC086320 AAH86320 Q5U222  
BC108369 AAI08370 Q8BTS0  
BC129873 AAI29874 A1L333  
BC129874 AAI29875 Q8BTS0  
AK013106 BAB28651 Q9CSD9  
AK088887 BAC40633 Q8BTS0  
AK132779 BAE21355 Q3V0Z8  
AK135173 BAE22450 Q3UXW3  
AK166045 BAE38540 Q8BTS0  
AK166698 BAE38954 Q8BTS0  
X65627 CAA46581 Q61656 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ddx5 NP_031866 R.norvegicus Ddx5 287765   NP_001007614 100
H.sapiens DDX5 1655 Gene Info NP_004387 99
N.crassa NCU07839 3879108   XP_962960 61
S.cerevisiae DBP2 855611   NP_014287 59
S.pombe dbp2 2541383   NP_596523 58
A.gambiae AgaP_AGAP012045 1280623   XP_320481 57
D.melanogaster CG10777 31707   NP_572424 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta