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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Csk, c-src tyrosine kinase
Sequence ID:NM_007783
Entrez Gene ID:12988
Ensembl ID:ENSMUSG00000032312

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 B|9 32.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 57626646 - 57645653

 Exon Info From UCSC:
NM_007783

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4206879Full LengthBC018394c-src tyrosine kinase
5685297Full LengthBC052006c-src tyrosine kinase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031809  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007783 NP_031809 P41241 EC 2.7.10.2 SH2
SH3_1
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U05247 AAA18766 P41241 EC 2.7.10.2
BC018394 AAH18394 P41241 EC 2.7.10.2
BC052006 AAH52006 P41241 EC 2.7.10.2
AK013057 BAC25388 Q8BIS9  
AK137297 BAE23297 Q3UVH2  
AK156058 BAE33565 P41241 EC 2.7.10.2
AK170815 BAE42047 P41241 EC 2.7.10.2
X57242 CAA40518 P41241 EC 2.7.10.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csk NP_031809 H.sapiens CSK 1445 Gene Info NP_001120662 99
R.norvegicus Csk 315707   NP_001025210 99
D.melanogaster Csk 41398   NP_788638 64
A.gambiae AgaP_AGAP003986 1278803   XP_318436 61
C.elegans csk-1 266817   NP_001021778 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta