Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stbd1, Starch binding domain 1
Sequence ID:NM_175096
Entrez Gene ID:52331
Ensembl ID:ENSMUSG00000047963

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E2|5 52.0

Chromosomal Position (from UCSC)

Chromosomal Position:5: 92603054 - 92604821

NM_175096 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12879303207693032362
28819859303390793035604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40107321Full LengthBC118661starch binding domain 1
40107322Full LengthBC118615starch binding domain 1
30054137IncompleteBC052666DNA segment, Chr 5, ERATO Doi 593, expressed

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780305  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175096 NP_780305 Q8C7E7 CBM_20

Related Sequences

 
mRNAGenPeptSwissProt
BC118615 AAI18616 Q147V6
BC118661 AAI18662 Q8C7E7
AK050416 BAC34244 Q8C7E7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stbd1 NP_780305 R.norvegicus Stbd1 305234   NP_001014010 90
H.sapiens STBD1 8987 Gene Info NP_003934 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)