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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Thoc1, THO complex 1
Sequence ID:NM_153552
Entrez Gene ID:225160
Ensembl ID:ENSMUSG00000024287

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 A1|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 9958179 - 9961077

 Exon Info From UCSC:
NM_153552

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4010605Full LengthBC024951THO complex 1
4947434IncompleteBC027149THO complex 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705780  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001038589 NP_001033678      
NM_021522 NP_067497 Q9JMA1 EC 3.4.19.12 UCH
NM_153552 NP_705780 Q8R3N6   Death

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC005571 AAH05571 Q9JMA1 EC 3.4.19.12
BC024951 AAH24951 Q8R3N6  
BC050197 AAH50197 Q80UN0  
AB034633 BAA93551 Q9JMA1 EC 3.4.19.12
AK011322 BAB27544 Q9JMA1 EC 3.4.19.12
AK029977 BAC26713 Q9JMA1 EC 3.4.19.12
AK031785 BAC27548 Q8R3N6  
AK032200 BAC27754 Q8R3N6  
AK042867 BAC31387 Q3UTN0
Q8R3N6
 
AK045909 BAC32528 Q9JMA1 EC 3.4.19.12
AK139307 BAE23950 Q3UTN0  
AK170933 BAE42125 Q3TC32  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Thoc1 NP_705780 H.sapiens THOC1 9984 Gene Info NP_005122 96
A.gambiae AgaP_AGAP004070 1270873   XP_309625 45
D.melanogaster Hpr1 40723   NP_649594 41
C.elegans thoc-1 173460   NP_493796 37
N.crassa NCU07865 3879265   XP_963126 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)