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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tmc2, transmembrane channel-like gene family 2
Sequence ID:NM_138655
Entrez Gene ID:192140
Ensembl ID:ENSMUSG00000060332

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 130195193 - 130264445

 Exon Info From UCSC:
NM_138655

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062021Full LengthBC156587transmembrane channel-like gene family 2
100015573BC148655transmembrane channel-like gene family 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619596  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138655 NP_619596 Q8R4P4 TMC

Related Sequences

 
mRNAGenPeptSwissProt
BC148655 AAI48656  
BC156587 AAI56588  
AF417581 AAL86402 Q8R4P4
AY263156 AAP35264 Q8R4P4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmc2 NP_619596 R.norvegicus Tmc2 296153   NP_001099980 96
H.sapiens TMC2 117532 Gene Info NP_542789 84
A.gambiae AgaP_AGAP007628 1269600   XP_308243 40
D.melanogaster CG3280 39117   NP_648336 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)