Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1s, complement component 1, s subcomponent
Sequence ID:XM_003946203
NM_001097617
NM_144938
Entrez Gene ID:50908
Ensembl ID:ENSMUSG00000038521

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F2|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 124530388 - 124542331

 Exon Info From UCSC:
NM_001097617
NM_144938

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4196654Full LengthBC018319complement component 1, s subcomponent
5097206Full LengthBC022123complement component 1, s subcomponent
40059749Full LengthBC111880complement component 1, s subcomponent

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659187  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001097617 NP_001091086    
NM_144938 NP_659187   EGF
Sushi
Trypsin
CUB
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC018319 AAH18319 Q8CG14 EC 3.4.21.42
BC022123 AAH22123 Q8CG14 EC 3.4.21.42
BC111880 AAI11881 Q14DT6  
AF459019 AAO15558 Q8CG14 EC 3.4.21.42
AK087522 BAC39910 Q8CG14 EC 3.4.21.42
AK172453 BAE43013 Q3T9K7  
XM_003946203 XP_003946252    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1s NP_659187 M.musculus Gm5077 317677 Gene Info NP_776289 93
R.norvegicus C1s 192262   NP_620255 82
H.sapiens C1S 716 Gene Info NP_001725 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta