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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tspan12, tetraspanin 12
Sequence ID:NM_173007
Entrez Gene ID:269831
Ensembl ID:ENSMUSG00000029669

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A3.1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 21771394 - 21852111

NM_173007 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115422172139421722935
154316862174557721745720
168717942174987821749985
179518692175623821756312
187020052178538721785522
200620882178641221786494
208922242180100921801144
222523802180201121802166
238124902180240521802514

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3674585Full LengthBC068240tetraspanin 12
6808971Full LengthBC065152tetraspanin 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766595  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173007 NP_766595 Q8BKT6 Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
BC065152 AAH65152 Q8BKT6
BC068240 AAH68240 Q8BKT6
AK033554 BAC28354 Q8BKT6
AK050737 BAC34399 Q8BKT6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tspan12 NP_766595 R.norvegicus Tspan12 362326   NP_001015026 100
H.sapiens TSPAN12 23554 Gene Info NP_036470 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)