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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rab21, RAB21, member RAS oncogene family
Sequence ID:NM_024454
Entrez Gene ID:216344
Ensembl ID:ENSMUSG00000020132

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, t-cell, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 D1

Chromosomal Position (from UCSC)

Chromosomal Position:10: 115290771 - 115315346

NM_024454 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
331082114726917114727966
10831171114731926114732014
11721226114732484114732538
12271290114735883114735946
12911398114738578114738685
13991458114739787114739846
14591856114752249114752646

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6490069Full LengthBC055042RAB21, member RAS oncogene family
1528710IncompleteBC040104RAB21, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077774  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024454 NP_077774 P35282 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC055042 AAH55042 P35282
M79302 AAK14826 P35282
AK172891 BAD32169 Q6A0C7
AB232615 BAF02877 Q0PD35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab21 NP_077774 R.norvegicus Rab21 299799   NP_001004238 100
H.sapiens RAB21 23011 Gene Info NP_055814 97
D.melanogaster Rab21 3355163   NP_001036321 64
C.elegans rab-21 187932   NP_495854 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)