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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Repin1, replication initiator 1
Sequence ID:NM_001079901
NM_001079902
NM_001079903
NM_001079904
NM_001079905
NM_175099
Entrez Gene ID:58887
Ensembl ID:ENSMUSG00000052751

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B2.3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 48599083 - 48599904

 Exon Info From UCSC:
NM_001079901
NM_001079902
NM_001079903
NM_001079904
NM_001079905
NM_175099

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5687175Full LengthBC085128replication initiator 1
5251514IncompleteBC092301replication initiator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780308  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079901 NP_001073370    
NM_001079902 NP_001073371    
NM_001079903 NP_001073372    
NM_001079904 NP_001073373    
NM_001079905 NP_001073374    
NM_175099 NP_780308 Q5U4E2 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC085128 AAH85128 Q5U4E2
BC092301 AAH92301 Q569U7
AK089041 BAC40716 Q5U4E2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Repin1 NP_780308 R.norvegicus Repin1 445541   NP_001005893 96
H.sapiens REPIN1 29803 Gene Info NP_001093165 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)