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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ctnnal1, catenin (cadherin associated protein), alpha-like 1
Sequence ID:NM_018761
Entrez Gene ID:54366
Ensembl ID:ENSMUSG00000038816

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4|4 C1

Chromosomal Position (from UCSC)

Chromosomal Position:4: 56812317 - 56865195

 Exon Info From UCSC:
NM_018761

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30012833Full LengthBC050070catenin (cadherin associated protein), alpha-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061231  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018761 NP_061231 O88327 Vinculin

Related Sequences

 
mRNAGenPeptSwissProt
AF006071 AAC26012 O88327
BC050070 AAH50070 O88327

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctnnal1 NP_061231 R.norvegicus Ctnnal1 298019   NP_001100119 93
H.sapiens CTNNAL1 8727 Gene Info NP_003789 88
C.elegans ctn-1 171818   NP_491008 42
A.gambiae AgaP_AGAP011097 1270830   XP_309552 41
D.melanogaster alpha-catenin-related 49713   NP_652073 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)