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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gsx2, GS homeobox 2
Sequence ID:NM_133256
Entrez Gene ID:14843
Ensembl ID:ENSMUSG00000035946

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.3|5 82.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 75077007 - 75077886

NM_133256 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17377547162575472361
73816657547299075473917

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40045976IncompleteBC134359genomic screened homeo box 2
40045977IncompleteBC119464genomic screened homeo box 2
40045978IncompleteBC119465genomic screened homeo box 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573555  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133256 NP_573555 P31316 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
S79041 AAB34947 P31316
AK159070 BAE34794 Q3TXX0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gsx2 NP_573555 R.norvegicus Gsx2 364140   NP_001131035 98
H.sapiens GSX2 170825 Gene Info NP_573574 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)