Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sh3yl1, Sh3 domain YSC-like 1
Sequence ID:NM_013709
Entrez Gene ID:24057
Ensembl ID:ENSMUSG00000020669

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A2|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 30911841 - 30916039

NM_013709 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15593159653331597091
5606703160709931607209
6717843160962831609741
7858493161167431611738
8509623162443831624550
96310913162515531625283
109212543162683131626993
125513333162765431627732
133413903164371231643768
139117363164466831645013

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3154966Full LengthBC010296Sh3 domain YSC-like 1
4483634Full LengthBC061488Sh3 domain YSC-like 1
5149633Full LengthBC110043Sh3 domain YSC-like 1
6313231Full LengthBC058557Sh3 domain YSC-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038737  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013709 NP_038737 O08641 SH3_1
DUF500

Related Sequences

 
mRNAGenPeptSwissProt
BC010296 AAH10296 O08641
BC058557 AAH58557 O08641
BC061488 AAH61488 O08641
BC110043 AAI10044 O08641
D85926 BAA19679 O08641
AK141199 BAE24582 O08641

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sh3yl1 NP_038737 R.norvegicus Sh3yl1 362724   NP_001102175 99
H.sapiens SH3YL1 26751 Gene Info NP_001153069 93
N.crassa NCU03888 3873753   XP_957527 57
S.cerevisiae LSB3 850580   NP_219497 52
S.cerevisiae YSC84 856409   NP_011880 51
S.pombe SPAPJ696.02 2543305   NP_593048 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)