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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hps1, Hermansky-Pudlak syndrome 1 homolog (human)
Sequence ID:NM_019424
Entrez Gene ID:192236
Ensembl ID:ENSMUSG00000025188

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C3|19 42.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 42755195 - 42757821

 Exon Info From UCSC:
NM_019424

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6848298Full LengthBC089331Hermansky-Pudlak syndrome 1 homolog (human)
6484622IncompleteBC046329Hermansky-Pudlak syndrome 1 homolog (human)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019424 NP_062297    

Related Sequences

 
mRNAGenPeptSwissProt
U78315 AAB60929 O08983
U97149 AAB68792 O08983
AF003866 AAB68817 O08983
AF003867 AAB68818  
BC046329 AAH46329 Q80VD7
BC089331 AAH89331 Q5FWJ4
AK031397 BAC27385 Q8CD56
AK154994 BAE32981 Q3U309
AK171225 BAE42327 Q3TBI2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hps1 NP_062297 R.norvegicus Hps1 114638   NP_414541 91
H.sapiens HPS1 3257 Gene Info NP_000186 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)