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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1
Sequence ID:NM_008302
Entrez Gene ID:15516
Ensembl ID:ENSMUSG00000023944

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B3|17 15.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 45567777 - 45573261

 Exon Info From UCSC:
NM_008302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6808699Full LengthBC088985heat shock protein 90 alpha (cytosolic), class B member 1
3486522IncompleteBC002167heat shock protein 90kDa alpha (cytosolic), class B member 1
3588159IncompleteBC044888heat shock protein 90 alpha (cytosolic), class B member 1
4163314IncompleteBC049951heat shock protein 90 alpha (cytosolic), class B member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032328  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008302 NP_032328 Q71LX8 HSP90
HATPase_c

Related Sequences

 
mRNAGenPeptSwissProt
M18186 AAA37865 P11499
M36829 AAA37866 P11499
S46109 AAB23704 P11499
U89426 AAC36532 P11499
BC044888 AAH44888 Q811H6
BC049951 AAH49951 Q80YC2
BC088985 AAH88985 Q71LX8
AF465639 AAQ04842 Q71LX8
AK135366 BAE22506 Q71LX8
AK146205 BAE26978 Q71LX8
AK146809 BAE27449 P11499

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hsp90ab1 NP_032328 H.sapiens HSP90AB1 3326 Gene Info NP_031381 100
R.norvegicus Hsp90ab1 301252   NP_001004082 100
A.gambiae HSP83_ANOGA 1270128   XP_308800 82
D.melanogaster Hsp83 38389   NP_523899 78
C.elegans daf-21 179971   NP_506626 77
A.thaliana HSP81-2 835701   NP_001190553 71
A.thaliana Hsp81.4 835698   NP_200411 71
A.thaliana HSP81-3 835699   NP_200412 71
P.falciparum PF07_0029 2655065   XP_001348998 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)