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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smarcd2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Sequence ID:NM_001130187
NM_031878
Entrez Gene ID:83796
Ensembl ID:ENSMUSG00000078619

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 106263180 - 106272808

 Exon Info From UCSC:
NM_001130187
NM_031878

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2647494Full LengthBC005732SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114084  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130187 NP_001123659 Q99JR8  
NM_031878 NP_114084 Q99JR8 SWIB

Related Sequences

 
mRNAGenPeptSwissProt
BC005732 AAH05732 Q99JR8
AK159259 BAE34940 Q3TXH6
AK166123 BAE38583 Q3TM59

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarcd2 NP_001123659 R.norvegicus Smarcd2 83833   NP_114189 100
H.sapiens SMARCD2 6603 Gene Info NP_001091896 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)