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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdh5, cadherin 5
Sequence ID:NM_009868
Entrez Gene ID:12562
Ensembl ID:ENSMUSG00000031871

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 104101643 - 104144501

 Exon Info From UCSC:
NM_009868

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6831962Full LengthBC054790cadherin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033998  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009868 NP_033998 P55284 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC054790 AAH54790 P55284
D63942 BAA22617 P55284
AK167620 BAE39672 Q3TJ23
X83930 CAA58782 P55284

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdh5 NP_033998 R.norvegicus Cdh5 307618   NP_001100877 93
H.sapiens CDH5 1003 Gene Info NP_001786 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)