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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Xpo1, exportin 1, CRM1 homolog (yeast)
Sequence ID:NM_001035226
NM_134014
Entrez Gene ID:103573
Ensembl ID:ENSMUSG00000020290

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 23291588 - 23298249

 Exon Info From UCSC:
NM_001035226
NM_134014

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3156478Full LengthBC012276exportin 1, CRM1 homolog (yeast)
5321933Full LengthBC025628exportin 1, CRM1 homolog (yeast)
6821729Full LengthBC062912exportin 1, CRM1 homolog (yeast)
5355327IncompleteBC029714exportin 1, CRM1 homolog (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598775  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001035226 NP_001030303 Q6P5F9  
NM_134014 NP_598775 Q6P5F9 IBN_N
Xpo1

Related Sequences

 
mRNAGenPeptSwissProt
BC012276 AAH12276 Q921J0
BC025628 AAH25628 Q921J0
BC062912 AAH62912 Q6P5F9
AK037196 BAC29747 Q8BYY5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Xpo1 NP_001030303 R.norvegicus Xpo1 85252   NP_445942 100
H.sapiens XPO1 7514 Gene Info NP_003391 98
A.gambiae AgaP_AGAP009929 1279344   XP_319051 73
D.melanogaster emb 34167   NP_723391 72
S.pombe crm1 3361487   NP_001018253 56
C.elegans xpo-1 179160   NP_741567 53
N.crassa NCU01820 3872064   XP_955917 53
A.thaliana XPO1A 831565   NP_197204 50
A.thaliana XPO1B 821074   NP_566193 50
S.cerevisiae CRM1 853133   NP_011734 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta