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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Whsc1l1, Wolf-Hirschhorn syndrome candidate 1-like 1 (human)
Sequence ID:NM_001081269
NM_001001735
Entrez Gene ID:234135
Ensembl ID:ENSMUSG00000054823

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 25715600 - 25719665

 Exon Info From UCSC:
NM_001081269
NM_001001735

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068126Full LengthBC167226Wolf-Hirschhorn syndrome candidate 1-like 1 (human)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001735 NP_001001735    
NM_001081269 NP_001074738    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC064447 AAH64447 Q6P2L6 EC 2.1.1.43
BC167226 AAI67226    
AK079952 BAC37792 Q6P2L6 EC 2.1.1.43
AK132725 BAE21322 Q6P2L6 EC 2.1.1.43
AK156746 BAE33834 Q6P2L6 EC 2.1.1.43
AK170040 BAE41526 Q6P2L6 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Whsc1l1 NP_001074738 R.norvegicus Whsc1l1 290831   NP_001099560 95
H.sapiens WHSC1L1 54904 Gene Info NP_075447 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)