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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrpprc, leucine-rich PPR-motif containing
Sequence ID:NM_028233
Entrez Gene ID:72416
Ensembl ID:ENSMUSG00000024120

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E4|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 84705248 - 84752344

 Exon Info From UCSC:
NM_028233

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6417407Full LengthBC059862leucine-rich PPR-motif containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082509  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028233 NP_082509 Q6PB66 PPR

Related Sequences

 
mRNAGenPeptSwissProt
BC004681 AAH04681 Q99KF9
BC059862 AAH59862 Q6PB66
AK013955 BAB29082 Q6PB66

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrpprc NP_082509 R.norvegicus Lrpprc 313867   NP_001008519 90
H.sapiens LRPPRC 10128 Gene Info NP_573566 75
D.melanogaster bsf 35100   NP_523596 31
A.gambiae AgaP_AGAP008770 1275629   XP_557938 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)