Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc39a6, solute carrier family 39 (metal ion transporter), member 6
Sequence ID:NM_139143
Entrez Gene ID:106957
Ensembl ID:ENSMUSG00000024270

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 A2|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 24579880 - 24601572

NM_139143 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2412202473838124739577
122114112474081724741007
141214922474252024742600
149318702474362624744003
187119762474824724748352
197721952475476624754984
219623652475624324756412
236625492475773024757913
255033742475931524760139
337539052476178724762317

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6337369Full LengthBC055012solute carrier family 39 (metal ion transporter), member 6
6813896Full LengthBC054780solute carrier family 39 (metal ion transporter), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_631882  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139143 NP_631882 Q8C145 Zip

Related Sequences

 
mRNAGenPeptSwissProt
BC054780 AAH54780 Q8C145
BC055012 AAH55012 Q8C145
AB071697 BAB86300 Q8C145
AK028976 BAC26223 Q8C145

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc39a6 NP_631882 R.norvegicus Slc39a6 291733   NP_001019916 95
H.sapiens SLC39A6 25800 Gene Info NP_036451 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)