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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Scfd1, Sec1 family domain containing 1
Sequence ID:NM_029825
Entrez Gene ID:76983
Ensembl ID:ENSMUSG00000020952

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:12|12 C1

Chromosomal Position (from UCSC)

Chromosomal Position:12: 51377579 - 51450096

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5151118Full LengthBC027793Sec1 family domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084101  

Protein Infomation

NM_029825 NP_084101 Q8BRF7 Sec1

Related Sequences

BC027793 AAH27793 Q8BRF7
AK014070 BAB29141 Q8BRF7
AK041028 BAC30788 Q8BRF7
AK044943 BAC32152 Q8BRF7
AK129238 BAC98048 Q6ZQ26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Scfd1 NP_084101 R.norvegicus Scfd1 54350   NP_062237 99
H.sapiens SCFD1 23256 Gene Info NP_057190 97
A.gambiae AgaP_AGAP011358 1270593   XP_309291 62
D.melanogaster Slh 33434   NP_995613 60
C.elegans F43D9.3 185707   NP_001122697 50
A.thaliana ATSLY1 816310   NP_179389 42
S.pombe sly1 2539096   NP_588374 40
N.crassa NCU04252 3877406   XP_961243 40
S.cerevisiae SLY1 851770   NP_010475 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)