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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ate1, arginyltransferase 1
Sequence ID:NM_001029895
NM_001136054
NM_001271343
NM_013799
Entrez Gene ID:11907
Ensembl ID:ENSMUSG00000030850

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 130394140 - 130519524

 Exon Info From UCSC:
NM_001029895
NM_001136054
NM_013799

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503326Full LengthBC042601arginyltransferase 1
6826691Full LengthBC050948arginyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038827  NP_001025066  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001029895 NP_001025066 Q4FCQ7   ATE_N
ATE_C
NM_001136054 NP_001129526      
NM_001271343 NP_001258272      
NM_013799 NP_038827 Q9Z2A5 EC 2.3.2.8 ATE_N
ATE_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC042601 AAH42601 Q9Z2A5 EC 2.3.2.8
BC050948 AAH50948 Q80YP1  
DQ093639 AAZ03496 Q4FCQ7  
DQ093640 AAZ03497 Q4FCQ6  
AK077471 BAC36816 Q8BP95  
AK138277 BAE23608 Q3UUL7  
AK148442 BAE28555 Q9Z2A5 EC 2.3.2.8
AK167591 BAE39649 Q9Z2A5 EC 2.3.2.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ate1 NP_038827 R.norvegicus Ate1 293526   NP_001099770 94
H.sapiens ATE1 11101 Gene Info NP_008972 79
D.melanogaster Ate1 37288   NP_725939 43
C.elegans K07A1.9 172800   NP_492549 42
A.thaliana ATE1 830454   NP_196189 42
A.thaliana ATE2 820295   NP_187733 41
A.gambiae AgaP_AGAP010373 1272670   XP_311571 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)