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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Abcf2, ATP-binding cassette, sub-family F (GCN20), member 2
Sequence ID:NM_001190443
NM_013853
Entrez Gene ID:27407
Ensembl ID:ENSMUSG00000028953

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 24565645 - 24568764

 Exon Info From UCSC:
NM_001190443
NM_013853

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3583837Full LengthBC003300ATP-binding cassette, sub-family F (GCN20), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038881  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190443 NP_001177372    
NM_013853 NP_038881 Q99LE6 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
AF213382 AAF31422 Q99LE6
BC003300 AAH03300 Q99LE6
AK003005 BAC25016 Q99LE6
AK087990 BAC40079 Q99LE6
AK137233 BAE23280 Q3UVI9
AK147937 BAE28242 Q99LE6
AK151545 BAE30491 Q99LE6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abcf2 NP_038881 H.sapiens ABCF2 10061 Gene Info NP_005683 99
D.melanogaster CG9281 32508   NP_573057 70
A.gambiae AgaP_AGAP002693 1273267   XP_312228 69
A.thaliana GCN1 836200   NP_200887 65
C.elegans abcf-2 176771   NP_499779 63
S.cerevisiae ARB1 856758   NP_010953 52
N.crassa NCU08920 3874827   XP_958689 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)