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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Csnk1d, casein kinase 1, delta
Sequence ID:NM_027874
NM_139059
Entrez Gene ID:104318
Ensembl ID:ENSMUSG00000025162

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 120961748 - 120991092

 Exon Info From UCSC:
NM_027874
NM_139059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585286Full LengthBC004604casein kinase 1, delta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082150  NP_620690  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027874 NP_082150 Q3UBT6   Pkinase
NM_139059 NP_620690 Q9DC28 EC 2.7.11.1
EC 2.7.11.26
Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC004604 AAH04604 Q9DC28 EC 2.7.11.1
EC 2.7.11.26
AK004606 BAB23405 Q9DC28 EC 2.7.11.1
EC 2.7.11.26
AK088642 BAC40472 Q9DC28 EC 2.7.11.1
EC 2.7.11.26
AK140317 BAE24329 Q3USK2  
AK146600 BAE27294 Q3UBT6  
AK150815 BAE29878 Q3UBT6  
AK152721 BAE31444 Q9DC28 EC 2.7.11.1
EC 2.7.11.26
AK157812 BAE34206 Q9DC28 EC 2.7.11.1
EC 2.7.11.26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csnk1d NP_082150 H.sapiens CSNK1D 1453 Gene Info NP_620693 100
R.norvegicus Csnk1d 64462   NP_620691 100
A.thaliana ckl5 816466   NP_179537 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta