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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sall3, sal-like 3 (Drosophila)
Sequence ID:NM_178280
Entrez Gene ID:20689
Ensembl ID:ENSMUSG00000024565

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E3|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 80968542 - 80972639

NM_178280 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1635468116311281166642
354738878116791981168259
388867798116847681171367
678069038118319381183316

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5040116IncompleteBC025906sal-like 3 (Drosophila)
6830685IncompleteBC094218sal-like 3 (Drosophila)
6833590IncompleteBC072631sal-like 3 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_840064  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178280 NP_840064   zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC072631 AAH72631 Q62255
AK045051 BAC32197 Q62255
X97581 CAA66196 Q62255

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sall3 NP_840064 R.norvegicus Sall3 364910   NP_001102362 91
H.sapiens SALL3 27164 Gene Info NP_741996 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)