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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. S100a8, S100 calcium binding protein A8 (calgranulin A)
Sequence ID:NM_013650
Entrez Gene ID:20201
Ensembl ID:ENSMUSG00000056054

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1-F2|3 43.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 90669070 - 90670029

NM_013650 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1329047299290473023
331969047344090473603
1973929047376090473955

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
864657Full LengthBC078629S100 calcium binding protein A8 (calgranulin A)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038678  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013650 NP_038678 P27005
Q53X15
efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
M83218 AAB07229 P27005
Q53X15
S57123 AAB25840 P27005
BC078629 AAH78629 P27005
Q53X15
AK157837 BAE34219 P27005
Q53X15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus S100a8 NP_038678 R.norvegicus S100a8 116547   NP_446274 81
H.sapiens S100A8 6279 Gene Info NP_002955 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)