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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Grpel1, GrpE-like 1, mitochondrial
Sequence ID:NM_024478
Entrez Gene ID:17713
Ensembl ID:ENSMUSG00000029198

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 36465184 - 36474077

NM_024478 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1713680783336807903
722343681208636812248
2353163681325036813331
31733383681370436816725

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3589725Full LengthBC002284GrpE-like 1, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024478 NP_077798 Q99LP6 GrpE

Related Sequences

 
mRNAGenPeptSwissProt
BC002284 AAH02284 Q99LP6
AK048732 BAC33437 Q99LP6
AK050445 BAC34257 Q99LP6
AK089113 BAC40758 Q99LP6
AK139561 BAE24062 Q3UTB8
AK161688 BAE36532 Q99LP6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Grpel1 NP_077798 R.norvegicus Grpel1 79563   NP_077813 98
H.sapiens GRPEL1 80273 Gene Info NP_079472 88
A.gambiae AgaP_AGAP011150 1270777   XP_309497 59
A.gambiae AgaP_AGAP012770 1268932   XP_307508 58
D.melanogaster Roe1 36508   NP_610886 57
C.elegans C34C12.8 175449   NP_497713 47
A.thaliana AR192 828785   NP_567757 46
N.crassa NCU01516 3873128   XP_956965 45
S.pombe mge1 2541039   NP_596677 45
A.thaliana AT5G55200 835613   NP_200331 42
P.falciparum PF11_0258 810805   XP_001347929 39
S.cerevisiae MGE1 854407   NP_014875 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)