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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc7a12, solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
Sequence ID:NM_080852
Entrez Gene ID:140918
Ensembl ID:ENSMUSG00000039710

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 14480698 - 14505818

NM_080852 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
137711448069814481456
7729031449722514497356
90412651449904814499409
126617391450534414505817

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014992Full LengthBC146476solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
100014390BC140320solute carrier family 7 (cationic amino acid transporter, y+ system), member 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_543128  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080852 NP_543128 Q8VIE6 AA_permease

Related Sequences

 
mRNAGenPeptSwissProt
BC140320 AAI40321  
BC146476 AAI46477  
AB055005 BAB83620 Q8VIE6
AJ417663 CAD10395 Q8R2J1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc7a12 NP_543128 R.norvegicus Slc7a12 294881   NP_001011948 81
R.norvegicus LOC361914 361914   NP_001017465 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)