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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Glra4, glycine receptor, alpha 4 subunit
Sequence ID:NM_010297
Entrez Gene ID:14657
Ensembl ID:ENSMUSG00000018595

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F1|X 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 136757695 - 136775911

NM_010297 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1313133292212133292524
314463133297257133297406
464678133301722133301936
679819133307261133307401
820902133308864133308946
9031126133309087133309310
11271194133310024133310091
11951325133310371133310501
13261411133314174133314259

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40052661Full LengthBC110630glycine receptor, alpha 4 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034427  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010297 NP_034427 Q61603 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
BC110630 AAI10631 Q2TB05
AF462147 AAL69899 Q61603
DQ109809 AAZ17380 Q61603
AK085727 BAC39521 Q8C3J3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Glra4 NP_034427 R.norvegicus Glra4 367912   XP_346351 98
H.sapiens GLRA4 441509 Gene Info NP_001019623 95
D.melanogaster Rdl 39054   NP_729462 46
A.gambiae AgaP_AGAP006028 1276697   XP_316071 43
C.elegans lgc-38 3565717   NP_498532 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)