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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Matr3, Matrin 3
Sequence ID:NM_010771
Entrez Gene ID:17184
Ensembl ID:ENSMUSG00000037236

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 C|18 15.0

Chromosomal Position (from UCSC)

Chromosomal Position:18: 35572333 - 35591581

 Exon Info From UCSC:
NM_010771

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3989914Full LengthBC029070matrin 3
6854095Full LengthBC090833matrin 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010771 NP_034901 Q5BL18
Q8K310
 

Related Sequences

 
mRNAGenPeptSwissProt
BC029070 AAH29070 Q5BL18
Q8K310
BC090833 AAH90833 Q5BL18
Q8K310
AY223547 AAP46151 Q7TN66
AK087939 BAC40050 Q5BL18
Q8K310
AK129199 BAC98009 Q6ZQ61
AK135937 BAE22731 Q5BL18
Q8K310
AK148384 BAE28522 Q3UFN8
AK157744 BAE34177 Q3TZN1
AK161128 BAE36204 Q3TTX0
CT010322 CAJ18530 Q4FJT0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Matr3 NP_034901 R.norvegicus Matr3 29150   NP_062022 100
H.sapiens MATR3 9782 Gene Info NP_954659 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta