Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chchd3, Coiled-coil-helix-coiled-coil-helix domain containing 3
Sequence ID:NM_025336
Entrez Gene ID:66075
Ensembl ID:ENSMUSG00000053768

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 B1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 32792641 - 33060217

NM_025336 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17003274222632742925
7018363275388932754024
8379073280214432802214
9089913284229132842374
99211093291820032918317
111011913295848232958563
119212793299933632999423
128014323300999933010151

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5124504Full LengthBC021941coiled-coil-helix-coiled-coil-helix domain containing 3
3496200IncompleteBC016528coiled-coil-helix-coiled-coil-helix domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079612  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025336 NP_079612 Q9CRB9 DUF737
CHCH

Related Sequences

 
mRNAGenPeptSwissProt
BC016528 AAH16528 Q91VG6
BC021941 AAH21941 Q9CRB9
AK002263 BAB21974 Q9CRB9
AK003519 BAB22832 Q9CRB9
AK006643 BAB24685 Q9D9P1
AK145337 BAE26374 Q9D9P1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chchd3 NP_079612 R.norvegicus Chchd3 296966   NP_001100058 92
H.sapiens CHCHD3 54927 Gene Info NP_060282 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)