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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clcc1, chloride channel CLIC-like 1
Sequence ID:NM_001177770
NM_001177771
NM_145543
Entrez Gene ID:229725
Ensembl ID:ENSMUSG00000027884

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 108653941 - 108678839

 Exon Info From UCSC:
NM_001177770
NM_001177771
NM_145543

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498611Full LengthBC003247chloride channel CLIC-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663518  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177770 NP_001171241    
NM_001177771 NP_001171242    
NM_145543 NP_663518 Q99LI2 MCLC

Related Sequences

 
mRNAGenPeptSwissProt
BC003247 AAH03247 Q99LI2
AK169803 BAE41377 Q99LI2
AK171296 BAE42376 Q99LI2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clcc1 NP_001171241 R.norvegicus Clcc1 170927   NP_596905 85
H.sapiens CLCC1 23155 Gene Info NP_001041675 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)