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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ssna1, Sjogren's syndrome nuclear autoantigen 1
Sequence ID:NM_023464
Entrez Gene ID:68475
Ensembl ID:ENSMUSG00000026966

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 25271050 - 25272416

NM_023464 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15432512655825127100
5447432512744825127647
7448642512781725127937

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5067090Full LengthBC048360Sjogren's syndrome nuclear autoantigen 1
5098653Full LengthBC037081Sjogren's syndrome nuclear autoantigen 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023464 NP_075953 Q9JJ94  

Related Sequences

 
mRNAGenPeptSwissProt
BC037081 AAH37081 Q9JJ94
BC048360 AAH48360 Q9JJ94
AB041656 BAA95103 Q9JJ94
AK003356 BAB22733 Q78YP7
AK088418 BAC40344 Q9JJ94

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ssna1 NP_075953 H.sapiens SSNA1 8636 Gene Info NP_003722 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)