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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sall1, Sal-like 1 (Drosophila)
Sequence ID:NM_021390
Entrez Gene ID:58198
Ensembl ID:ENSMUSG00000031665

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 D

Chromosomal Position (from UCSC)

Chromosomal Position:8: 89028227 - 89042431

NM_021390 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2015949155114291552716
159550499155384291557296
505051429156625091566342
514352759156792891568060

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6839137Full LengthBC062937sal-like 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067365  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021390 NP_067365 Q9ER74 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC062937 AAH62937 Q6P5E3
AB051409 BAB55673 Q9ER74

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sall1 NP_067365 R.norvegicus Sall1 307740   NP_001100885 96
H.sapiens SALL1 6299 Gene Info NP_002959 91
D.melanogaster salr 34568   NP_723669 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)