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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Htr2a, 5-hydroxytryptamine (serotonin) receptor 2A
Sequence ID:NM_172812
Entrez Gene ID:15558
Ensembl ID:ENSMUSG00000034997

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D2|14 41.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 74640839 - 74706859

NM_172812 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115057504064675042150
150617067504479475044994
170729717510540175106665

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047362Full LengthBC1089725-hydroxytryptamine (serotonin) receptor 2A
40047364Full LengthBC1089735-hydroxytryptamine (serotonin) receptor 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766400  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172812 NP_766400 Q543D4
P35363
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
S49542 AAB24369 P35363
BC108972 AAI08973 Q543D4
P35363
BC108973 AAI08974 Q543D4
P35363
AK053140 BAC35279 Q543D4
P35363

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Htr2a NP_766400 R.norvegicus Htr2a 29595   NP_058950 97
H.sapiens HTR2A 3356 Gene Info NP_000612 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)