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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snx13, sorting nexin 13
Sequence ID:NM_001014973
Entrez Gene ID:217463
Ensembl ID:ENSMUSG00000020590

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 A3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 35145455 - 35147476

 Exon Info From UCSC:
NM_001014973

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6825168Full LengthBC067201sorting nexin 13
6852346Full LengthBC056394sorting nexin 13

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001014973  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001014973 NP_001014973 Q6PHS6 RGS
PX
PXA
Nexin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC056394 AAH56394 Q6PHS6
BC067201 AAH67201 Q6NX82
AK122352 BAC65634 Q80TT7
AK133353 BAE21613 Q3V091
AK148157 BAE28382 Q3UG27
AK154425 BAE32577 Q3U457
AK170737 BAE41990 Q3TCG6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snx13 NP_001014973 H.sapiens SNX13 23161 Gene Info NP_055947 97
R.norvegicus Snx13 362731   NP_001102178 87
C.elegans Y116A8C.26 178482   NP_503026 35
A.thaliana AT2G15900 816086   NP_179190 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)