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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chst15, carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
Sequence ID:NM_029935
Entrez Gene ID:77590
Ensembl ID:ENSMUSG00000030930

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F4

Chromosomal Position (from UCSC)

Chromosomal Position:7: 132238275 - 132270550

NM_029935 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12210139427937139430146
22112358139433099139433246
23592515139439546139439702
25162672139454365139454521
26732819139458339139458485
28203159139460601139460940
31604156139461687139462683
41574265139508729139508837

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4240286Full LengthBC031443RIKEN cDNA 4631426J05 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084211  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_029935 NP_084211 Q91XQ5 EC 2.8.2.33 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC031443 AAH31443 Q91XQ5 EC 2.8.2.33
AF320786 AAK69604 Q91XQ5 EC 2.8.2.33
AK019474 BAB31743 Q91XQ5 EC 2.8.2.33
AK035637 BAC29133 Q91XQ5 EC 2.8.2.33
AK043803 BAC31658 Q91XQ5 EC 2.8.2.33
AK082318 BAC38463 Q91XQ5 EC 2.8.2.33
AK083614 BAC38968 Q91XQ5 EC 2.8.2.33
AK122324 BAC65606 Q91XQ5 EC 2.8.2.33
AB187269 BAD89559 Q91XQ5 EC 2.8.2.33

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst15 NP_084211 R.norvegicus Chst15 286974   NP_775432 97
H.sapiens CHST15 51363 Gene Info NP_056976 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)