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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Syt8, synaptotagmin VIII
Sequence ID:NM_018802
Entrez Gene ID:55925
Ensembl ID:ENSMUSG00000031098

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F5|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 142436833 - 142440305

NM_018802 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1116149620881149620996
117320149623974149624177
321508149624261149624448
509607149624798149624896
608766149625026149625184
767934149625258149625425
9351040149625564149625669
10411174149625755149625888
11751505149625972149626302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40045982Full LengthBC103602synaptotagmin VIII
40045986Full LengthBC103665synaptotagmin VIII
40045988Full LengthBC100747synaptotagmin VIII
40045989Full LengthBC100748synaptotagmin VIII

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061272  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018802 NP_061272   C2

Related Sequences

 
mRNAGenPeptSwissProt
U20107 AAA87723 Q9R0N6
BC100747 AAI00748 Q496Q4
BC100748 AAI00749 Q496Q3
BC103602 AAI03603 Q496Q3
BC103665 AAI03666 Q496Q3
AB026805 BAA85777 Q9R0N6
AK075832 BAC35993 Q9R0N6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syt8 NP_061272 R.norvegicus Syt8 60566   NP_445777 92
H.sapiens SYT8 90019 Gene Info NP_612634 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)