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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ppara, peroxisome proliferator activated receptor alpha
Sequence ID:NM_001113418
NM_011144
Entrez Gene ID:19013
Ensembl ID:ENSMUSG00000022383

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E2|15 48.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 85803106 - 85805588

 Exon Info From UCSC:
NM_001113418
NM_011144

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4222384Full LengthBC016892peroxisome proliferator activated receptor alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035274  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113418 NP_001106889    
NM_011144 NP_035274 P23204
Q542P9
Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
BC016892 AAH16892 P23204
Q542P9
AK035676 BAC29149 P23204
Q542P9
AK081709 BAC38303 P23204
Q542P9
AK149460 BAE28893 P23204
Q542P9
X57638 CAA40856 P23204
X89577 CAA61754 P23204

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppara NP_001106889 R.norvegicus Ppara 25747   NP_037328 98
H.sapiens PPARA 5465 Gene Info NP_001001928 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta