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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Syne3, spectrin repeat containing, nuclear envelope family member 3
Sequence ID:NM_001042699
NM_172500
Entrez Gene ID:212073
Ensembl ID:ENSMUSG00000054150

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 104929965 - 105009809

 Exon Info From UCSC:
NM_001042699
NM_172500

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4507746Full LengthBC099694RIKEN cDNA 4831426I19 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766088  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042699 NP_001036164 Q4FZC9  
NM_172500 NP_766088   Spectrin

Related Sequences

 
mRNAGenPeptSwissProt
BC099694 AAH99694 Q4FZC9
AK029216 BAC26351 Q4FZC9
AK030542 BAC27012 Q4FZC9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 4831426I19Rik NP_001036164 R.norvegicus RGD1304563 299356   NP_001100232 93
H.sapiens C14orf49 161176 Gene Info NP_689805 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)