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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Npc1l1, NPC1-like 1
Sequence ID:NM_207242
Entrez Gene ID:237636
Ensembl ID:ENSMUSG00000020447

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A1|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6211012 - 6230143

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40086103Full LengthBC131789NPC1-like 1
40086101IncompleteBC131788NPC1-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997125  

Protein Infomation

NM_207242 NP_997125 Q6T3U4 Patched

Related Sequences

BC131788 AAI31789 A3KMG9
BC131789 AAI31790 A2RRR0
AY437866 AAR97887 Q6T3U4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Npc1l1 NP_997125 H.sapiens NPC1L1 29881 Gene Info NP_037521 77
C.elegans ncr-1 180719   NP_508771 30
C.elegans ncr-2 176165   NP_498813 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)