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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Necap2, NECAP endocytosis associated 2
Sequence ID:NM_025383
Entrez Gene ID:66147
Ensembl ID:ENSMUSG00000028923

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 141067256 - 141078311

NM_025383 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
171116140622427140623526
11171201140624109140624193
12021379140625970140626147
13801488140628443140628551
14891570140629422140629503
15711675140629589140629693
16761776140630874140630974
17771909140634127140634259

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5002765Full LengthBC037069NECAP endocytosis associated 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079659  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025383 NP_079659 Q9D1J1 DUF1681

Related Sequences

 
mRNAGenPeptSwissProt
BC037069 AAH37069 Q9D1J1
AK003463 BAB22803 Q9D1J1
AK009714 BAB26458 Q9D1J1
AK155871 BAE33474 Q9D1J1
AK156566 BAE33757 Q3TBZ6
AK170987 BAE42161 Q3TBZ6
BK000657 DAA01434 Q9D1J1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Necap2 NP_079659 R.norvegicus Necap2 298598   NP_954527 96
H.sapiens NECAP2 55707 Gene Info NP_060560 89
C.elegans Y110A2AR.3 173638   NP_494398 52
A.thaliana NAP4 839378   NP_563693 48
N.crassa NCU04345 3872473   XP_956326 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)